single-cell combinatorial indexing RNA sequencing assay (Assay Type)

Synonyms:sciRNAseq

Description:A single-cell RNA sequencing assay that involves single cell combinatorial indexing ('sci-') strategy to profile the transcriptomes of single cells or nuclei without single cell isolation.

Results found

Linked to

	Label	Description
	4DNFI39J6HDR.fastq.gz File (Entity type)	A 130 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFIR6L86SN.csv.gz File (Entity type)	A 585 KB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFI8PAER6C.fastq.gz File (Entity type)	A 4.20 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFILZRRBN1.csv.gz File (Entity type)	A 194 KB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFIGLLC9SF.fastq.gz File (Entity type)	A 657 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project
	4DNFI3WF7FCX.fastq.gz File (Entity type)	A 3.12 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFIDI27YX8.fastq.gz File (Entity type)	A 668 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project
	4DNFIXHP9PZK.matrix File (Entity type)	A 16.2 MB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFIB6399BJ.fastq.gz File (Entity type)	A 8.36 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project
	4DNFID7KKCU5.fastq.gz File (Entity type)	A 546 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project

4DNFI39J6HDR.fastq.gz

File (Entity type)

A 130 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFIR6L86SN.csv.gz

File (Entity type)

A 585 KB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFI8PAER6C.fastq.gz

File (Entity type)

A 4.20 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFILZRRBN1.csv.gz

File (Entity type)

A 194 KB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFIGLLC9SF.fastq.gz

File (Entity type)

A 657 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project

4DNFI3WF7FCX.fastq.gz

File (Entity type)

A 3.12 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFIDI27YX8.fastq.gz

File (Entity type)

A 668 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project

4DNFIXHP9PZK.matrix

File (Entity type)

A 16.2 MB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFIB6399BJ.fastq.gz

File (Entity type)

A 8.36 GB file from 4DN produced from OBI:0003105 as part of the 72c61c12 2750 4b27 a3d6 07bf5c8d5e80 project

4DNFID7KKCU5.fastq.gz

File (Entity type)

A 546 MB file from 4DN produced from OBI:0003105 as part of the fcc7f634 9252 499f b79c 380795af2ddd project

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.