bulk assay for transposase-accessible chromatin using sequencing (Assay Type)

Synonyms:bulk ATAC-seq

Description:An assay for transposase-accessible chromatin using sequencing in which the sample that is sequenced is derived from a collection of cells, such as a tissue sample or entire cell culture, and therefore provides results representative of the aggregate of sample cells.

Results found

Linked to

	Label	Description
	4DNFIKEMDMVT.bed.gz File (Entity type)	A 792 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFI2PAGF67.bb File (Entity type)	A 8.31 MB file from 4DN produced from OBI:0003089 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIRGGM5BV.fastq.gz File (Entity type)	A 1.99 GB file from 4DN produced from OBI:0003089 as part of the 619535d9 ec49 4f36 9cad a0887cf535cb project
	4DNFIR9HD5RL.bb File (Entity type)	A 3.87 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIJ1AJNFD.bb File (Entity type)	A 6.49 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIPLDA6QM.fastq.gz File (Entity type)	A 7.18 GB file from 4DN produced from OBI:0003089 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFISM8EMLW.fastq.gz File (Entity type)	A 2.81 GB file from 4DN produced from OBI:0003089 as part of the b9ff5f2d 68aa 4a4b 9c3d 54707e1798ec project
	4DNFIB2W9UNT.fastq.gz File (Entity type)	A 6.55 GB file from 4DN produced from OBI:0003089 as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project
	4DNFI433WK8D.bb File (Entity type)	A 10.6 MB file from 4DN produced from OBI:0003089 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI95OPU8H.bed.gz File (Entity type)	A 255 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIKEMDMVT.bed.gz

File (Entity type)

A 792 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFI2PAGF67.bb

File (Entity type)

A 8.31 MB file from 4DN produced from OBI:0003089 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIRGGM5BV.fastq.gz

File (Entity type)

A 1.99 GB file from 4DN produced from OBI:0003089 as part of the 619535d9 ec49 4f36 9cad a0887cf535cb project

4DNFIR9HD5RL.bb

File (Entity type)

A 3.87 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIJ1AJNFD.bb

File (Entity type)

A 6.49 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIPLDA6QM.fastq.gz

File (Entity type)

A 7.18 GB file from 4DN produced from OBI:0003089 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFISM8EMLW.fastq.gz

File (Entity type)

A 2.81 GB file from 4DN produced from OBI:0003089 as part of the b9ff5f2d 68aa 4a4b 9c3d 54707e1798ec project

4DNFIB2W9UNT.fastq.gz

File (Entity type)

A 6.55 GB file from 4DN produced from OBI:0003089 as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project

4DNFI433WK8D.bb

File (Entity type)

A 10.6 MB file from 4DN produced from OBI:0003089 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI95OPU8H.bed.gz

File (Entity type)

A 255 MB file from 4DN produced from OBI:0003089 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.