DataKnowledgeCloudtrainingcoordination

BS Q52ENBDS (Biosample)

Subject:

PT SXPBKE6E

Subject (Entity type)

Project:

SD ZXJFFMEF

Project (Entity type)

Disease:

cancer

Disease (Entity type)

Dcc Asset:

C2M2 datapackage.zip

Processed File (Entity type)

Dcc:

Kids First

DCC (Entity type)

Anatomy:

femur

Anatomy (Entity type)

Creation Time:2020-06-11T20:54:20.696085

Results found

Linked to

	Label	Description
	b7a95323-4790-4648-aa6e-cfc5a0b85767.mutect2 somatic.norm.annot.public.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	b7a95323-4790-4648-aa6e-cfc5a0b85767.mutect2 somatic.norm.annot.protected.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	5cb1df6c-046c-443c-8bbb-d02aa49a7782.GatherBqsrReports.recal data.csv File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	1dca601a-6366-4239-bb18-7172c94dd041.consensus somatic.norm.annot.protected.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	8edfc4f5-2dbb-44ee-83d5-d7e17b67ab32.strelka2 somatic.norm.annot.protected.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	5cb1df6c-046c-443c-8bbb-d02aa49a7782.qual score dist.pdf File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	PT SXPBKE6E Subject (Entity type)	A subject produced as part of the SD ZXJFFMEF project
	3746ba8b-374f-4a42-a471-4dc02ba7039a.gainloss.txt File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	3746ba8b-374f-4a42-a471-4dc02ba7039a.manta.somaticSV.reheadered.vcf.gz.tbi File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project
	5cb1df6c-046c-443c-8bbb-d02aa49a7782.insert size metrics File (Entity type)	A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

b7a95323-4790-4648-aa6e-cfc5a0b85767.mutect2 somatic.norm.annot.public.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

b7a95323-4790-4648-aa6e-cfc5a0b85767.mutect2 somatic.norm.annot.protected.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

5cb1df6c-046c-443c-8bbb-d02aa49a7782.GatherBqsrReports.recal data.csv

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

1dca601a-6366-4239-bb18-7172c94dd041.consensus somatic.norm.annot.protected.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

8edfc4f5-2dbb-44ee-83d5-d7e17b67ab32.strelka2 somatic.norm.annot.protected.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

5cb1df6c-046c-443c-8bbb-d02aa49a7782.qual score dist.pdf

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

Subject

PT SXPBKE6E

Subject (Entity type)

A subject produced as part of the SD ZXJFFMEF project

File

3746ba8b-374f-4a42-a471-4dc02ba7039a.gainloss.txt

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

3746ba8b-374f-4a42-a471-4dc02ba7039a.manta.somaticSV.reheadered.vcf.gz.tbi

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

File

5cb1df6c-046c-443c-8bbb-d02aa49a7782.insert size metrics

File (Entity type)

A file from Kids First produced from OBI:0002118 as part of the SD ZXJFFMEF project

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.