SRS017139 (Biosample)

Subject:

HHS 159551223

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmcgi2 159551223 supragingival plaque Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_159551223_supragingival_plaque" collec...
	SRS017139 aa.fasta.bz2 File (Entity type)	A 21.5 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Supragingival plaque.tar.bz2 File (Entity type)	A 259 MB file from HMP produced from OBI:0002623 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrarg2 SRS017139 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS017139 sample to MetaRef reference gen...
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	SRS017139.rapsearch2.m8 File (Entity type)	A 894 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmrac2 SRS017139 Collection (Entity type)	Reads from SRS017139 sample are aligned to its assembled contigs.

hmcgi2 159551223 supragingival plaque

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_159551223_supragingival_plaque" collec...

SRS017139 aa.fasta.bz2

File (Entity type)

A 21.5 MB file from HMP produced from OBI:0002623 as part of the HHS project

Supragingival plaque.tar.bz2

File (Entity type)

A 259 MB file from HMP produced from OBI:0002623 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrarg2 SRS017139

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS017139 sample to MetaRef reference gen...

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

SRS017139.rapsearch2.m8

File (Entity type)

A 894 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmrac2 SRS017139

Collection (Entity type)

Reads from SRS017139 sample are aligned to its assembled contigs.

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.