SRS019026 (Biosample)

Subject:

HHS 763961826

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

palatine tonsil

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS019026 hmwgsqcv1.tar.bz2 File (Entity type)	A 1.87 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm1 palatine tonsils Collection (Entity type)	SOAPdenovo v.1.04 assembled sequences from Illumina raw reads generated by whole metagenome sequenci...
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 SRS019026 genels Collection (Entity type)	Gene abundance file (ie how many copies are present in the community) for SRS019026 sample
	hmgc-palatine tonsils-0.90-centroids.fa.bz2 File (Entity type)	A 71.7 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS019026.scaffolds.fa.bz2 File (Entity type)	A 23.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	hmrac2 SRS019026 Collection (Entity type)	Reads from SRS019026 sample are aligned to its assembled contigs.
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

SRS019026 hmwgsqcv1.tar.bz2

File (Entity type)

A 1.87 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm1 palatine tonsils

Collection (Entity type)

SOAPdenovo v.1.04 assembled sequences from Illumina raw reads generated by whole metagenome sequenci...

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 SRS019026 genels

Collection (Entity type)

Gene abundance file (ie how many copies are present in the community) for SRS019026 sample

hmgc-palatine tonsils-0.90-centroids.fa.bz2

File (Entity type)

A 71.7 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS019026.scaffolds.fa.bz2

File (Entity type)

A 23.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmrac2 SRS019026

Collection (Entity type)

Reads from SRS019026 sample are aligned to its assembled contigs.

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.