DataKnowledgeCloudtrainingcoordination

BS C5AMH7AC (Biosample)

Subject:

PT SY6W6B0Z

Subject (Entity type)

Project:

SD BHJXBDQK

Project (Entity type)

Disease:

cancer

Disease (Entity type)

Dcc Asset:

C2M2 datapackage.zip

Processed File (Entity type)

Dcc:

Kids First

DCC (Entity type)

Anatomy:

central nervous system

Anatomy (Entity type)

Creation Time:2022-04-04T18:12:51.579832

Results found

Linked to

	Label	Description
	1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.gatk cnv.funcotated.tsv File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.controlfreec.ratio.png File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	225b952c-ede8-4c8d-9816-1c9595f1a5b4.mutect2 filtered.merged.reheadered.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	225b952c-ede8-4c8d-9816-1c9595f1a5b4.mutect2 somatic.norm.annot.protected.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	1238361 D1.cram.crai File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	225b952c-ede8-4c8d-9816-1c9595f1a5b4.BEST.results File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.manta.somaticSV.reheadered.vcf.gz.tbi File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.call.cns File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	225b952c-ede8-4c8d-9816-1c9595f1a5b4.theta2.subclone1.cns File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project
	225b952c-ede8-4c8d-9816-1c9595f1a5b4.theta2.total.seg File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.gatk cnv.funcotated.tsv

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.controlfreec.ratio.png

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

225b952c-ede8-4c8d-9816-1c9595f1a5b4.mutect2 filtered.merged.reheadered.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

225b952c-ede8-4c8d-9816-1c9595f1a5b4.mutect2 somatic.norm.annot.protected.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

1238361 D1.cram.crai

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

225b952c-ede8-4c8d-9816-1c9595f1a5b4.BEST.results

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.manta.somaticSV.reheadered.vcf.gz.tbi

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

1e2c9abb-3b74-4c28-9fd0-7b386ce056b3.call.cns

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

225b952c-ede8-4c8d-9816-1c9595f1a5b4.theta2.subclone1.cns

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

File

225b952c-ede8-4c8d-9816-1c9595f1a5b4.theta2.total.seg

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD BHJXBDQK project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.