CFDE Workbench
DataKnowledgeCloudtrainingcoordination
CFDE Workbench

BS SXF4C1KR (Biosample)

Subject:

PT 3E2DBRZY

Subject (Entity type)
Project:

SD DYPMEHHF

Project (Entity type)
Dcc Asset:

C2M2 datapackage.zip

Processed File (Entity type)
Dcc:

Kids First

DCC (Entity type)
Creation Time:2018-08-07T16:33:08.113587
Results found

Linked to

 

Label

Description

 

File

cf671f6c-20f6-4ff3-b7e1-ac019b07221c.normal.gatk cnv.denoised.png

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

Subject

PT 3E2DBRZY

Subject (Entity type)

A subject produced as part of the SD DYPMEHHF project

File

c785dc03-28ab-4a47-ad4d-e5108fa415a6.mutect2 somatic.norm.annot.public.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

26747cdc-16be-472c-b0d6-89a4ad470da5.GatherBqsrReports.recal data.csv

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

26747cdc-16be-472c-b0d6-89a4ad470da5.cram.crai

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

cf671f6c-20f6-4ff3-b7e1-ac019b07221c.normal.gatk cnv.modelFinal.seg

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

cf671f6c-20f6-4ff3-b7e1-ac019b07221c.gatk cnv.funcotated.tsv

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

26747cdc-16be-472c-b0d6-89a4ad470da5.variant calling summary metrics

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

26747cdc-16be-472c-b0d6-89a4ad470da5.pre adapter detail metrics

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

File

cf671f6c-20f6-4ff3-b7e1-ac019b07221c.tumor.gatk cnv.modeled.png

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    cf671f6c-20f6-4ff3-b7e1-ac019b07221c.normal.gatk cnv.denoised.png

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • Subject

    PT 3E2DBRZY

    Subject (Entity type)

    A subject produced as part of the SD DYPMEHHF project

  • File

    c785dc03-28ab-4a47-ad4d-e5108fa415a6.mutect2 somatic.norm.annot.public.vcf.gz

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    26747cdc-16be-472c-b0d6-89a4ad470da5.GatherBqsrReports.recal data.csv

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    26747cdc-16be-472c-b0d6-89a4ad470da5.cram.crai

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    cf671f6c-20f6-4ff3-b7e1-ac019b07221c.normal.gatk cnv.modelFinal.seg

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    cf671f6c-20f6-4ff3-b7e1-ac019b07221c.gatk cnv.funcotated.tsv

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    26747cdc-16be-472c-b0d6-89a4ad470da5.variant calling summary metrics

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    26747cdc-16be-472c-b0d6-89a4ad470da5.pre adapter detail metrics

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

  • File

    cf671f6c-20f6-4ff3-b7e1-ac019b07221c.tumor.gatk cnv.modeled.png

    File (Entity type)

    A file from Kids First produced from OBI:0002117 as part of the SD DYPMEHHF project

    • DISPLAY PER PAGE
    CFDE Workbench
    Report a bug
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    @CFDE Workbench 2026
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    CFDE Workbench
    Report a bug
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    @CFDE Workbench 2026
    This repository is under review for potential modification in compliance with Administration directives.