57c1244c-1215-40c2-84e8-d36d5b287423 (Collection)

Subset Collection:

8f13e239-fe60-45e7-a1a0-ab58c415b63e

Collection (Entity type)

Project:

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

Dcc Asset:

251215 4dn c2m2 submission.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESFPSJFSJ

Description:4DNESFPSJFSJ: Hi-C on H1-DE cells - protocol variations - Formaldehyde+EGS, DpnII In situ Hi-C with DpnII on definitive endoderm derived from H1 embryonic stem cells (Maehr lab protocol) with 1% Formaldehyde and 3mM EGS crosslinking

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESFPSJFSJ

Results found

Linked to

	Label	Description
	4DNFIJM39UBT.bed.gz File (Entity type)	A 181 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIOOWRTWG.txt.gz File (Entity type)	A 5.34 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIR9CVDO1.bw File (Entity type)	A 8.45 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIR8OU6QJ.hic File (Entity type)	A 1.83 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFICRMFRPI.bw File (Entity type)	A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIC155OSQ.txt.gz File (Entity type)	A 1.06 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	44b0b763-065f-40f3-8432-8bd66d9f1be3 Subject (Entity type)	A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFI6TFGZQC.bw File (Entity type)	A 322 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	8f13e239-fe60-45e7-a1a0-ab58c415b63e Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESFPSJFSJ
	4DNFI8X4P4EL.pairs.gz File (Entity type)	A 3.49 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIJM39UBT.bed.gz

File (Entity type)

A 181 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIOOWRTWG.txt.gz

File (Entity type)

A 5.34 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIR9CVDO1.bw

File (Entity type)

A 8.45 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIR8OU6QJ.hic

File (Entity type)

A 1.83 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFICRMFRPI.bw

File (Entity type)

A 212 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIC155OSQ.txt.gz

File (Entity type)

A 1.06 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

44b0b763-065f-40f3-8432-8bd66d9f1be3

Subject (Entity type)

A subject from 4DN produced as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFI6TFGZQC.bw

File (Entity type)

A 322 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

8f13e239-fe60-45e7-a1a0-ab58c415b63e

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESFPSJFSJ

4DNFI8X4P4EL.pairs.gz

File (Entity type)

A 3.49 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.