2b48defb-d349-4720-892d-62a7a9ba1870 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

251215 4dn c2m2 submission.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESY7MOKC6

Description:4DNESY7MOKC6: Multiplexed FISH of AAVS1 locus in HEK293T - rTetR-KRAB (wildtype) with doxycyline treatment for 5 days + 22 days washout (mCitrine reporter OFF) Multiplexed FISH in HEK293T reporter cell line treated with doxycyline for 5 days causing reporter gene silencing followed by doxycycline wash-out for 22 days where reporter gene expression remains irreverisbly silenced, originally caused by 5-day recruitment of wt-KRAB (control and experiment relationships are described in detailed in 4DNFIWQ9QBOB supplementary file).

Creation Time:2025-06-02T00:00:00

Abbreviation:4DNESY7MOKC6

Results found

Linked to

	Label	Description
	b7c5d0c8-053e-4da3-b446-b68787a5a738 Project (Entity type)	LIVE-CELL MULTIPLEX SUPER-RESOLUTION IMAGING OF CHROMATIN STATE TRANSITIONS
	e8a03c47-cb4b-40c8-8780-ce179f1a6680 Subject (Entity type)	A subject from 4DN produced as part of the b7c5d0c8 053e 4da3 b446 b68787a5a738 project
	4DNFIWQ9QBOB.csv File (Entity type)	A 4.82 KB file from 4DN produced from OBI:0000185 as part of the b7c5d0c8 053e 4da3 b446 b68787a5a738 project
	72c6066f-f116-4c73-8fbe-4724416d2f88 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESY7MOKC6
	2cf1c7ff-ac2d-43fe-806e-f00ac012ce74 Collection (Entity type)	Biological replicate 6, Technical replicate 1 of 4DNESY7MOKC6
	51aadfb4-f412-42a7-8fcb-2983feefdfb5 Collection (Entity type)	Biological replicate 4, Technical replicate 1 of 4DNESY7MOKC6
	79f0d7e6-855c-4737-8888-750f80a5f374 Collection (Entity type)	Biological replicate 5, Technical replicate 1 of 4DNESY7MOKC6
	ab8b33e7-a9e6-4898-84ff-9e4fb30e6097 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESY7MOKC6
	8a10e0ce-068d-448c-8334-e641bac22c22 Collection (Entity type)	Biological replicate 3, Technical replicate 1 of 4DNESY7MOKC6

b7c5d0c8-053e-4da3-b446-b68787a5a738

Project (Entity type)

LIVE-CELL MULTIPLEX SUPER-RESOLUTION IMAGING OF CHROMATIN STATE TRANSITIONS

e8a03c47-cb4b-40c8-8780-ce179f1a6680

Subject (Entity type)

A subject from 4DN produced as part of the b7c5d0c8 053e 4da3 b446 b68787a5a738 project

4DNFIWQ9QBOB.csv

File (Entity type)

A 4.82 KB file from 4DN produced from OBI:0000185 as part of the b7c5d0c8 053e 4da3 b446 b68787a5a738 project

72c6066f-f116-4c73-8fbe-4724416d2f88

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESY7MOKC6

2cf1c7ff-ac2d-43fe-806e-f00ac012ce74

Collection (Entity type)

Biological replicate 6, Technical replicate 1 of 4DNESY7MOKC6

51aadfb4-f412-42a7-8fcb-2983feefdfb5

Collection (Entity type)

Biological replicate 4, Technical replicate 1 of 4DNESY7MOKC6

79f0d7e6-855c-4737-8888-750f80a5f374

Collection (Entity type)

Biological replicate 5, Technical replicate 1 of 4DNESY7MOKC6

ab8b33e7-a9e6-4898-84ff-9e4fb30e6097

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESY7MOKC6

8a10e0ce-068d-448c-8334-e641bac22c22

Collection (Entity type)

Biological replicate 3, Technical replicate 1 of 4DNESY7MOKC6

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.