GSE119424 GSE120214 TBXT brachyury inhibition 5 v 4 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE119424_GSE120214_TBXT_brachyury inhibition_5_v_4_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE119424_GSE120214_TBXT_brachyury inhibition_5_v_4_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE119424_GSE120214_TBXT_brachyury inhibition_5_v_4_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE119424_GSE120214_TBXT_brachyury inhibition_5_v_4_human_dn.

Results found

Linked to

	Label	Description
	SNHG3 Gene (Entity type)	ENSG00000242125 - small nucleolar RNA host gene 3
	SNHG4 Gene (Entity type)	ENSG00000281398 - small nucleolar RNA host gene 4
	POU3F3 Gene (Entity type)	ENSG00000269707 - POU class 3 homeobox 3
	CROCCP2 Gene (Entity type)	ENSG00000291072 - CROCC pseudogene 2
	SNHG15 Gene (Entity type)	ENSG00000232956 - small nucleolar RNA host gene 15
	MTCO2P12 Gene (Entity type)	ENSG00000229344 - MT-CO2 pseudogene 12
	LINC00839 Gene (Entity type)	ENSG00000185904 - long intergenic non-protein coding RNA 839
	CDH13-AS2 Gene (Entity type)	ENSG00000260228 - CDH13 antisense RNA 2
	MTATP6P1 Gene (Entity type)	ENSG00000248527 - MT-ATP6 pseudogene 1
	MAGI2-AS3 Gene (Entity type)	ENSG00000234456 - MAGI2 antisense RNA 3

SNHG3

Gene (Entity type)

ENSG00000242125 - small nucleolar RNA host gene 3

SNHG4

Gene (Entity type)

ENSG00000281398 - small nucleolar RNA host gene 4

POU3F3

Gene (Entity type)

ENSG00000269707 - POU class 3 homeobox 3

CROCCP2

Gene (Entity type)

ENSG00000291072 - CROCC pseudogene 2

SNHG15

Gene (Entity type)

ENSG00000232956 - small nucleolar RNA host gene 15

MTCO2P12

Gene (Entity type)

ENSG00000229344 - MT-CO2 pseudogene 12

LINC00839

Gene (Entity type)

ENSG00000185904 - long intergenic non-protein coding RNA 839

CDH13-AS2

Gene (Entity type)

ENSG00000260228 - CDH13 antisense RNA 2

MTATP6P1

Gene (Entity type)

ENSG00000248527 - MT-ATP6 pseudogene 1

MAGI2-AS3

Gene (Entity type)

ENSG00000234456 - MAGI2 antisense RNA 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.