GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 5 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_dn.

Results found

Linked to

	Label	Description
	SNHG1 Gene (Entity type)	ENSG00000255717 - small nucleolar RNA host gene 1
	THAP9-AS1 Gene (Entity type)	ENSG00000251022 - THAP9 antisense RNA 1
	SNHG3 Gene (Entity type)	ENSG00000242125 - small nucleolar RNA host gene 3
	SNHG4 Gene (Entity type)	ENSG00000281398 - small nucleolar RNA host gene 4
	PVT1 Gene (Entity type)	ENSG00000249859 - Pvt1 oncogene
	DUXAP8 Gene (Entity type)	ENSG00000206195 - double homeobox A pseudogene 8
	SNHG15 Gene (Entity type)	ENSG00000232956 - small nucleolar RNA host gene 15
	LINC00662 Gene (Entity type)	ENSG00000261824 - long intergenic non-protein coding RNA 662
	SNHG17 Gene (Entity type)	ENSG00000196756 - small nucleolar RNA host gene 17
	SNHG12 Gene (Entity type)	ENSG00000197989 - small nucleolar RNA host gene 12

SNHG1

Gene (Entity type)

ENSG00000255717 - small nucleolar RNA host gene 1

THAP9-AS1

Gene (Entity type)

ENSG00000251022 - THAP9 antisense RNA 1

SNHG3

Gene (Entity type)

ENSG00000242125 - small nucleolar RNA host gene 3

SNHG4

Gene (Entity type)

ENSG00000281398 - small nucleolar RNA host gene 4

PVT1

Gene (Entity type)

ENSG00000249859 - Pvt1 oncogene

DUXAP8

Gene (Entity type)

ENSG00000206195 - double homeobox A pseudogene 8

SNHG15

Gene (Entity type)

ENSG00000232956 - small nucleolar RNA host gene 15

LINC00662

Gene (Entity type)

ENSG00000261824 - long intergenic non-protein coding RNA 662

SNHG17

Gene (Entity type)

ENSG00000196756 - small nucleolar RNA host gene 17

SNHG12

Gene (Entity type)

ENSG00000197989 - small nucleolar RNA host gene 12

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.