GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 6 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_6_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_6_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_6_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_6_human_dn.

Results found

Linked to

	Label	Description
	SYNRG Gene (Entity type)	ENSG00000275066 - synergin gamma
	LUARIS Gene (Entity type)	ENSG00000231638 - lncRNA upregulator of antiviral response interferon signaling
	KARS1P2 Gene (Entity type)	ENSG00000230371 - lysyl-tRNA synthetase 1 pseudogene 2
	MIR1299 Gene (Entity type)	ENSG00000275377 - microRNA 1299
	RN7SKP178 Gene (Entity type)	ENSG00000201875 - RN7SK pseudogene 178
	MIR1249 Gene (Entity type)	ENSG00000221598 - microRNA 1249
	RN7SL700P Gene (Entity type)	ENSG00000244521 - RNA, 7SL, cytoplasmic 700, pseudogene
	API5 Gene (Entity type)	ENSG00000166181 - apoptosis inhibitor 5
	ZNRF2 Gene (Entity type)	ENSG00000180233 - zinc and ring finger 2
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38

SYNRG

Gene (Entity type)

ENSG00000275066 - synergin gamma

LUARIS

Gene (Entity type)

ENSG00000231638 - lncRNA upregulator of antiviral response interferon signaling

KARS1P2

Gene (Entity type)

ENSG00000230371 - lysyl-tRNA synthetase 1 pseudogene 2

MIR1299

Gene (Entity type)

ENSG00000275377 - microRNA 1299

RN7SKP178

Gene (Entity type)

ENSG00000201875 - RN7SK pseudogene 178

MIR1249

Gene (Entity type)

ENSG00000221598 - microRNA 1249

RN7SL700P

Gene (Entity type)

ENSG00000244521 - RNA, 7SL, cytoplasmic 700, pseudogene

API5

Gene (Entity type)

ENSG00000166181 - apoptosis inhibitor 5

ZNRF2

Gene (Entity type)

ENSG00000180233 - zinc and ring finger 2

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.