GSE189859 GSE189861 IDH1 knockout 4 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_4_v_2_human_dn.

Results found

Linked to

	Label	Description
	RPSA2 Gene (Entity type)	ENSG00000288920 - ribosomal protein SA 2
	NBPF26 Gene (Entity type)	ENSG00000273136 - NBPF member 26
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667
	MAGI2-AS3 Gene (Entity type)	ENSG00000234456 - MAGI2 antisense RNA 3
	SLC16A1-AS1 Gene (Entity type)	ENSG00000226419 - SLC16A1 antisense RNA 1
	LINC00869 Gene (Entity type)	ENSG00000291158 - long intergenic non-protein coding RNA 869
	PRECSIT Gene (Entity type)	ENSG00000255874 - p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript
	LINC01138 Gene (Entity type)	ENSG00000274020 - long intergenic non-protein coding RNA 1138
	MANCR Gene (Entity type)	ENSG00000231298 - mitotically associated long non coding RNA
	CHROMR Gene (Entity type)	ENSG00000223960 - cholesterol induced regulator of metabolism RNA

RPSA2

Gene (Entity type)

ENSG00000288920 - ribosomal protein SA 2

NBPF26

Gene (Entity type)

ENSG00000273136 - NBPF member 26

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

MAGI2-AS3

Gene (Entity type)

ENSG00000234456 - MAGI2 antisense RNA 3

SLC16A1-AS1

Gene (Entity type)

ENSG00000226419 - SLC16A1 antisense RNA 1

LINC00869

Gene (Entity type)

ENSG00000291158 - long intergenic non-protein coding RNA 869

PRECSIT

Gene (Entity type)

ENSG00000255874 - p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript

LINC01138

Gene (Entity type)

ENSG00000274020 - long intergenic non-protein coding RNA 1138

MANCR

Gene (Entity type)

ENSG00000231298 - mitotically associated long non coding RNA

CHROMR

Gene (Entity type)

ENSG00000223960 - cholesterol induced regulator of metabolism RNA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.