GSE140066 methotrexate 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE140066_methotrexate_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE140066_methotrexate_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE140066_methotrexate_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE140066_methotrexate_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	ZNF883 Gene (Entity type)	ENSG00000228623 - zinc finger protein 883
	TMEM217B Gene (Entity type)	ENSG00000286105 - transmembrane protein 217B
	TERC Gene (Entity type)	ENSG00000270141 - telomerase RNA component
	METTL21EP Gene (Entity type)	ENSG00000250878 - methyltransferase like 21E, pseudogene
	DIAPH1-AS1 Gene (Entity type)	ENSG00000246422 - DIAPH1 antisense RNA 1
	YBX1P4 Gene (Entity type)	ENSG00000213188 - Y-box binding protein 1 pseudogene 4
	EFCAB6-DT Gene (Entity type)	ENSG00000261251 - EFCAB6 divergent transcript
	RPS6P25 Gene (Entity type)	ENSG00000240616 - ribosomal protein S6 pseudogene 25
	LOC101927588 Gene (Entity type)	ENSG00000214803 - uncharacterized LOC101927588
	RPL7AP70 Gene (Entity type)	ENSG00000235776 - ribosomal protein L7a pseudogene 70

ZNF883

Gene (Entity type)

ENSG00000228623 - zinc finger protein 883

TMEM217B

Gene (Entity type)

ENSG00000286105 - transmembrane protein 217B

TERC

Gene (Entity type)

ENSG00000270141 - telomerase RNA component

METTL21EP

Gene (Entity type)

ENSG00000250878 - methyltransferase like 21E, pseudogene

DIAPH1-AS1

Gene (Entity type)

ENSG00000246422 - DIAPH1 antisense RNA 1

YBX1P4

Gene (Entity type)

ENSG00000213188 - Y-box binding protein 1 pseudogene 4

EFCAB6-DT

Gene (Entity type)

ENSG00000261251 - EFCAB6 divergent transcript

RPS6P25

Gene (Entity type)

ENSG00000240616 - ribosomal protein S6 pseudogene 25

LOC101927588

Gene (Entity type)

ENSG00000214803 - uncharacterized LOC101927588

RPL7AP70

Gene (Entity type)

ENSG00000235776 - ribosomal protein L7a pseudogene 70

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.