GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_1_human_up.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	MSL3B Gene (Entity type)	ENSG00000293137 - MSL complex subunit 3B
	GGNBP2 Gene (Entity type)	ENSG00000278311 - gametogenetin binding protein 2
	LINC01291 Gene (Entity type)	ENSG00000204792 - long intergenic non-protein coding RNA 1291
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667
	LOXL1-AS1 Gene (Entity type)	ENSG00000261801 - LOXL1 antisense RNA 1
	USP2-AS1 Gene (Entity type)	ENSG00000245248 - USP2 antisense RNA 1
	AHSA2P Gene (Entity type)	ENSG00000293434 - activator of HSP90 ATPase homolog 2, pseudogene
	LOC339260 Gene (Entity type)	ENSG00000233098 - uncharacterized LOC339260
	LINC00632 Gene (Entity type)	ENSG00000203930 - long intergenic non-protein coding RNA 632

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

MSL3B

Gene (Entity type)

ENSG00000293137 - MSL complex subunit 3B

GGNBP2

Gene (Entity type)

ENSG00000278311 - gametogenetin binding protein 2

LINC01291

Gene (Entity type)

ENSG00000204792 - long intergenic non-protein coding RNA 1291

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

LOXL1-AS1

Gene (Entity type)

ENSG00000261801 - LOXL1 antisense RNA 1

USP2-AS1

Gene (Entity type)

ENSG00000245248 - USP2 antisense RNA 1

AHSA2P

Gene (Entity type)

ENSG00000293434 - activator of HSP90 ATPase homolog 2, pseudogene

LOC339260

Gene (Entity type)

ENSG00000233098 - uncharacterized LOC339260

LINC00632

Gene (Entity type)

ENSG00000203930 - long intergenic non-protein coding RNA 632

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.