GSE225869 CD44 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE225869_CD44 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE225869_CD44 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE225869_CD44 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE225869_CD44 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	SYNRG Gene (Entity type)	ENSG00000275066 - synergin gamma
	GOLGA2P7 Gene (Entity type)	ENSG00000290689 - GOLGA2 pseudogene 7
	LINC02693 Gene (Entity type)	ENSG00000212719 - long intergenic non-protein coding RNA 2693
	LOC100506076 Gene (Entity type)	ENSG00000277701 - uncharacterized LOC100506076
	SMG1P7 Gene (Entity type)	ENSG00000261556 - SMG1 pseudogene 7
	BMS1P1 Gene (Entity type)	ENSG00000291069 - BMS1 pseudogene 1
	CEACAM22P Gene (Entity type)	ENSG00000290603 - CEA cell adhesion molecule 22, pseudogene
	GOLGA8IP Gene (Entity type)	ENSG00000291261 - golgin A8 family member I, pseudogene
	MTND6P4 Gene (Entity type)	ENSG00000249119 - MT-ND6 pseudogene 4
	LINC01962 Gene (Entity type)	ENSG00000248473 - long intergenic non-protein coding RNA 1962

SYNRG

Gene (Entity type)

ENSG00000275066 - synergin gamma

GOLGA2P7

Gene (Entity type)

ENSG00000290689 - GOLGA2 pseudogene 7

LINC02693

Gene (Entity type)

ENSG00000212719 - long intergenic non-protein coding RNA 2693

LOC100506076

Gene (Entity type)

ENSG00000277701 - uncharacterized LOC100506076

SMG1P7

Gene (Entity type)

ENSG00000261556 - SMG1 pseudogene 7

BMS1P1

Gene (Entity type)

ENSG00000291069 - BMS1 pseudogene 1

CEACAM22P

Gene (Entity type)

ENSG00000290603 - CEA cell adhesion molecule 22, pseudogene

GOLGA8IP

Gene (Entity type)

ENSG00000291261 - golgin A8 family member I, pseudogene

MTND6P4

Gene (Entity type)

ENSG00000249119 - MT-ND6 pseudogene 4

LINC01962

Gene (Entity type)

ENSG00000248473 - long intergenic non-protein coding RNA 1962

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.