GSE188631 DREAM knockout HeLa 0 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE188631_DREAM knockout_HeLa_0_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE188631_DREAM knockout_HeLa_0_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE188631_DREAM knockout_HeLa_0_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE188631_DREAM knockout_HeLa_0_v_2_human_dn.

Results found

Linked to

	Label	Description
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	MALAT1 Gene (Entity type)	ENSG00000251562 - metastasis associated lung adenocarcinoma transcript 1
	CRNDE Gene (Entity type)	ENSG00000245694 - colorectal neoplasia differentially expressed
	TALAM1 Gene (Entity type)	ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA
	LINC01106 Gene (Entity type)	ENSG00000175772 - long intergenic non-protein coding RNA 1106
	LINC02331 Gene (Entity type)	ENSG00000235269 - long intergenic non-protein coding RNA 2331
	ATP5MF-PTCD1 Gene (Entity type)	ENSG00000248919 - ATP5MF-PTCD1 readthrough
	MTND1P23 Gene (Entity type)	ENSG00000225972 - MT-ND1 pseudogene 23
	LOC389602 Gene (Entity type)	ENSG00000204876 - uncharacterized LOC389602
	TTTY10 Gene (Entity type)	ENSG00000229236 - testis expressed transcript, Y-linked 10

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

MALAT1

Gene (Entity type)

ENSG00000251562 - metastasis associated lung adenocarcinoma transcript 1

CRNDE

Gene (Entity type)

ENSG00000245694 - colorectal neoplasia differentially expressed

TALAM1

Gene (Entity type)

ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA

LINC01106

Gene (Entity type)

ENSG00000175772 - long intergenic non-protein coding RNA 1106

LINC02331

Gene (Entity type)

ENSG00000235269 - long intergenic non-protein coding RNA 2331

ATP5MF-PTCD1

Gene (Entity type)

ENSG00000248919 - ATP5MF-PTCD1 readthrough

MTND1P23

Gene (Entity type)

ENSG00000225972 - MT-ND1 pseudogene 23

LOC389602

Gene (Entity type)

ENSG00000204876 - uncharacterized LOC389602

TTTY10

Gene (Entity type)

ENSG00000229236 - testis expressed transcript, Y-linked 10

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.