GSE221386 romidepsin 3 v 0 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE221386_romidepsin_3_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE221386_romidepsin_3_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE221386_romidepsin_3_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE221386_romidepsin_3_v_0_human_up.

Results found

Linked to

	Label	Description
	RN7SK Gene (Entity type)	ENSG00000202198 - RNA component of 7SK nuclear ribonucleoprotein
	LOC100419928 Gene (Entity type)	ENSG00000255836 - M-phase phosphoprotein 8 pseudogene
	BMS1P10 Gene (Entity type)	ENSG00000237238 - BMS1 pseudogene 10
	H2AC18 Gene (Entity type)	ENSG00000288825 - H2A clustered histone 18
	LOC102724497 Gene (Entity type)	ENSG00000286739 - uncharacterized LOC102724497
	CCDC13-AS2 Gene (Entity type)	ENSG00000225611 - CCDC13 antisense RNA 2
	LINC00570 Gene (Entity type)	ENSG00000224177 - long intergenic non-protein coding RNA 570
	LOC105375423 Gene (Entity type)	ENSG00000286923 - uncharacterized LOC105375423
	MPPE1P2 Gene (Entity type)	ENSG00000225544 - MPPE1 pseudogene 2
	PPIAL4C Gene (Entity type)	ENSG00000288867 - peptidylprolyl isomerase A like 4C

RN7SK

Gene (Entity type)

ENSG00000202198 - RNA component of 7SK nuclear ribonucleoprotein

LOC100419928

Gene (Entity type)

ENSG00000255836 - M-phase phosphoprotein 8 pseudogene

BMS1P10

Gene (Entity type)

ENSG00000237238 - BMS1 pseudogene 10

H2AC18

Gene (Entity type)

ENSG00000288825 - H2A clustered histone 18

LOC102724497

Gene (Entity type)

ENSG00000286739 - uncharacterized LOC102724497

CCDC13-AS2

Gene (Entity type)

ENSG00000225611 - CCDC13 antisense RNA 2

LINC00570

Gene (Entity type)

ENSG00000224177 - long intergenic non-protein coding RNA 570

LOC105375423

Gene (Entity type)

ENSG00000286923 - uncharacterized LOC105375423

MPPE1P2

Gene (Entity type)

ENSG00000225544 - MPPE1 pseudogene 2

PPIAL4C

Gene (Entity type)

ENSG00000288867 - peptidylprolyl isomerase A like 4C

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.