GSE238018 MXRA8 knockout MDA-MB-231 3 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE238018_MXRA8 knockout_MDA-MB-231_3_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE238018_MXRA8 knockout_MDA-MB-231_3_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE238018_MXRA8 knockout_MDA-MB-231_3_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE238018_MXRA8 knockout_MDA-MB-231_3_v_2_human_up.

Results found

Linked to

	Label	Description
	ARHGAP23 Gene (Entity type)	ENSG00000275832 - Rho GTPase activating protein 23
	PKD1P1 Gene (Entity type)	ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1
	TRIM16L Gene (Entity type)	ENSG00000291110 - tripartite motif containing 16 like (pseudogene)
	CSF2RA Gene (Entity type)	ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	CASTOR3P Gene (Entity type)	ENSG00000291122 - CASTOR family member 3, pseudogene
	DHRSX Gene (Entity type)	ENSG00000292338 - dehydrogenase/reductase X-linked
	VPS9D1-AS1 Gene (Entity type)	ENSG00000261373 - VPS9D1 antisense RNA 1
	UCA1 Gene (Entity type)	ENSG00000214049 - urothelial cancer associated 1
	SYT15B Gene (Entity type)	ENSG00000277758 - synaptotagmin 15B

ARHGAP23

Gene (Entity type)

ENSG00000275832 - Rho GTPase activating protein 23

PKD1P1

Gene (Entity type)

ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1

TRIM16L

Gene (Entity type)

ENSG00000291110 - tripartite motif containing 16 like (pseudogene)

CSF2RA

Gene (Entity type)

ENSG00000292357 - colony stimulating factor 2 receptor subunit alpha

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

CASTOR3P

Gene (Entity type)

ENSG00000291122 - CASTOR family member 3, pseudogene

DHRSX

Gene (Entity type)

ENSG00000292338 - dehydrogenase/reductase X-linked

VPS9D1-AS1

Gene (Entity type)

ENSG00000261373 - VPS9D1 antisense RNA 1

UCA1

Gene (Entity type)

ENSG00000214049 - urothelial cancer associated 1

SYT15B

Gene (Entity type)

ENSG00000277758 - synaptotagmin 15B

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.