GSE119551 GSE119556 CEBPA knockdown THP-1 Ergocalciferol 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE119551_GSE119556_CEBPA knockdown_THP-1_Ergocalciferol_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE119551_GSE119556_CEBPA knockdown_THP-1_Ergocalciferol_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE119551_GSE119556_CEBPA knockdown_THP-1_Ergocalciferol_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE119551_GSE119556_CEBPA knockdown_THP-1_Ergocalciferol_1_v_3_human_up.

Results found

Linked to

	Label	Description
	PKD1P1 Gene (Entity type)	ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1
	TALAM1 Gene (Entity type)	ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA
	SIGLEC5 Gene (Entity type)	ENSG00000268500 - sialic acid binding Ig like lectin 5
	ICAM4-AS1 Gene (Entity type)	ENSG00000267607 - ICAM4 antisense RNA 1
	LOC102724019 Gene (Entity type)	ENSG00000240086 - uncharacterized LOC102724019
	PDCD6-AHRR Gene (Entity type)	ENSG00000288622 - PDCD6-AHRR readthrough (NMD candidate)
	CEP192P1 Gene (Entity type)	ENSG00000248596 - CEP192 pseudogene 1
	CAP1P1 Gene (Entity type)	ENSG00000240809 - CAP1 pseudogene 1
	LOC105378798 Gene (Entity type)	ENSG00000225087 - uncharacterized LOC105378798
	RPL21P98 Gene (Entity type)	ENSG00000243071 - ribosomal protein L21 pseudogene 98

PKD1P1

Gene (Entity type)

ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1

TALAM1

Gene (Entity type)

ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA

SIGLEC5

Gene (Entity type)

ENSG00000268500 - sialic acid binding Ig like lectin 5

ICAM4-AS1

Gene (Entity type)

ENSG00000267607 - ICAM4 antisense RNA 1

LOC102724019

Gene (Entity type)

ENSG00000240086 - uncharacterized LOC102724019

PDCD6-AHRR

Gene (Entity type)

ENSG00000288622 - PDCD6-AHRR readthrough (NMD candidate)

CEP192P1

Gene (Entity type)

ENSG00000248596 - CEP192 pseudogene 1

CAP1P1

Gene (Entity type)

ENSG00000240809 - CAP1 pseudogene 1

LOC105378798

Gene (Entity type)

ENSG00000225087 - uncharacterized LOC105378798

RPL21P98

Gene (Entity type)

ENSG00000243071 - ribosomal protein L21 pseudogene 98

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.