GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 9 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_dn.

Results found

Linked to

	Label	Description
	H3-3A Gene (Entity type)	ENSG00000163041 - H3.3 histone A
	SNHG3 Gene (Entity type)	ENSG00000242125 - small nucleolar RNA host gene 3
	SNHG4 Gene (Entity type)	ENSG00000281398 - small nucleolar RNA host gene 4
	SNHG15 Gene (Entity type)	ENSG00000232956 - small nucleolar RNA host gene 15
	CRNDE Gene (Entity type)	ENSG00000245694 - colorectal neoplasia differentially expressed
	SNHG12 Gene (Entity type)	ENSG00000197989 - small nucleolar RNA host gene 12
	SNHG26 Gene (Entity type)	ENSG00000228649 - small nucleolar RNA host gene 26
	LINC01234 Gene (Entity type)	ENSG00000249550 - long intergenic non-protein coding RNA 1234
	DUSP13A Gene (Entity type)	ENSG00000293543 - dual specificity phosphatase 13A
	STAG3L5P Gene (Entity type)	ENSG00000272752 - STAG3 cohesin complex component like 5, pseudogene

H3-3A

Gene (Entity type)

ENSG00000163041 - H3.3 histone A

SNHG3

Gene (Entity type)

ENSG00000242125 - small nucleolar RNA host gene 3

SNHG4

Gene (Entity type)

ENSG00000281398 - small nucleolar RNA host gene 4

SNHG15

Gene (Entity type)

ENSG00000232956 - small nucleolar RNA host gene 15

CRNDE

Gene (Entity type)

ENSG00000245694 - colorectal neoplasia differentially expressed

SNHG12

Gene (Entity type)

ENSG00000197989 - small nucleolar RNA host gene 12

SNHG26

Gene (Entity type)

ENSG00000228649 - small nucleolar RNA host gene 26

LINC01234

Gene (Entity type)

ENSG00000249550 - long intergenic non-protein coding RNA 1234

DUSP13A

Gene (Entity type)

ENSG00000293543 - dual specificity phosphatase 13A

STAG3L5P

Gene (Entity type)

ENSG00000272752 - STAG3 cohesin complex component like 5, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.