GSE183893 EP300 PORCN RNF43 knockout HPAF-II 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	SNHG18 Gene (Entity type)	ENSG00000250786 - small nucleolar RNA host gene 18
	NMRAL2P Gene (Entity type)	ENSG00000290862 - NmrA like redox sensor 2, pseudogene
	ZNF702P Gene (Entity type)	ENSG00000293317 - zinc finger protein 702, pseudogene
	ZNF826P Gene (Entity type)	ENSG00000291130 - zinc finger protein 826, pseudogene
	PCDHB1-AS1 Gene (Entity type)	ENSG00000279047 - PCDHB1 antisense RNA 1
	SLC7A11-AS1 Gene (Entity type)	ENSG00000250033 - SLC7A11 antisense RNA 1
	CD44-DT Gene (Entity type)	ENSG00000255521 - CD44 divergent transcript
	LINC00622 Gene (Entity type)	ENSG00000260941 - long intergenic non-protein coding RNA 622
	ZNF561-AS1 Gene (Entity type)	ENSG00000267106 - ZNF561 antisense RNA 1
	LINC00326 Gene (Entity type)	ENSG00000231023 - long intergenic non-protein coding RNA 326

SNHG18

Gene (Entity type)

ENSG00000250786 - small nucleolar RNA host gene 18

NMRAL2P

Gene (Entity type)

ENSG00000290862 - NmrA like redox sensor 2, pseudogene

ZNF702P

Gene (Entity type)

ENSG00000293317 - zinc finger protein 702, pseudogene

ZNF826P

Gene (Entity type)

ENSG00000291130 - zinc finger protein 826, pseudogene

PCDHB1-AS1

Gene (Entity type)

ENSG00000279047 - PCDHB1 antisense RNA 1

SLC7A11-AS1

Gene (Entity type)

ENSG00000250033 - SLC7A11 antisense RNA 1

CD44-DT

Gene (Entity type)

ENSG00000255521 - CD44 divergent transcript

LINC00622

Gene (Entity type)

ENSG00000260941 - long intergenic non-protein coding RNA 622

ZNF561-AS1

Gene (Entity type)

ENSG00000267106 - ZNF561 antisense RNA 1

LINC00326

Gene (Entity type)

ENSG00000231023 - long intergenic non-protein coding RNA 326

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.