GSE133447 GSE133448 MED25 ETV4 knockdown UFERSA-PC3 2 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133447_GSE133448_MED25_ETV4 knockdown_UFERSA-PC3_2_v_4_human_up.

Results found

Linked to

	Label	Description
	NSUN5P1 Gene (Entity type)	ENSG00000291151 - NSUN5 pseudogene 1
	AHSA2P Gene (Entity type)	ENSG00000293434 - activator of HSP90 ATPase homolog 2, pseudogene
	LINC00973 Gene (Entity type)	ENSG00000240476 - long intergenic non-protein coding RNA 973
	DPY19L2P2 Gene (Entity type)	ENSG00000291139 - DPY19L2 pseudogene 2
	FIRRE Gene (Entity type)	ENSG00000213468 - firre intergenic repeating RNA element
	FER1L4 Gene (Entity type)	ENSG00000088340 - fer-1 like family member 4 (pseudogene)
	LINC00472 Gene (Entity type)	ENSG00000233237 - long intergenic non-protein coding RNA 472
	CLUHP3 Gene (Entity type)	ENSG00000290927 - clustered mitochondria homolog pseudogene 3
	RNF216P1 Gene (Entity type)	ENSG00000196204 - ring finger protein 216 pseudogene 1
	LINC02577 Gene (Entity type)	ENSG00000228742 - long intergenic non-protein coding RNA 2577

NSUN5P1

Gene (Entity type)

ENSG00000291151 - NSUN5 pseudogene 1

AHSA2P

Gene (Entity type)

ENSG00000293434 - activator of HSP90 ATPase homolog 2, pseudogene

LINC00973

Gene (Entity type)

ENSG00000240476 - long intergenic non-protein coding RNA 973

DPY19L2P2

Gene (Entity type)

ENSG00000291139 - DPY19L2 pseudogene 2

FIRRE

Gene (Entity type)

ENSG00000213468 - firre intergenic repeating RNA element

FER1L4

Gene (Entity type)

ENSG00000088340 - fer-1 like family member 4 (pseudogene)

LINC00472

Gene (Entity type)

ENSG00000233237 - long intergenic non-protein coding RNA 472

CLUHP3

Gene (Entity type)

ENSG00000290927 - clustered mitochondria homolog pseudogene 3

RNF216P1

Gene (Entity type)

ENSG00000196204 - ring finger protein 216 pseudogene 1

LINC02577

Gene (Entity type)

ENSG00000228742 - long intergenic non-protein coding RNA 2577

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.