GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 9 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

Results found

Linked to

	Label	Description
	H3-7 Gene (Entity type)	ENSG00000273213 - H3.7 histone (putative)
	MTCO2P12 Gene (Entity type)	ENSG00000229344 - MT-CO2 pseudogene 12
	MIR100HG Gene (Entity type)	ENSG00000255248 - mir-100-let-7a-2-mir-125b-1 cluster host gene
	MAGI2-AS3 Gene (Entity type)	ENSG00000234456 - MAGI2 antisense RNA 3
	FRG1CP Gene (Entity type)	ENSG00000282826 - FSHD region gene 1 family member C, pseudogene
	C22orf46P Gene (Entity type)	ENSG00000293428 - CTA-216E10.6
	LOC339260 Gene (Entity type)	ENSG00000233098 - uncharacterized LOC339260
	NKILA Gene (Entity type)	ENSG00000278709 - NF-kappaB interacting lncRNA
	TGILR Gene (Entity type)	ENSG00000260604 - TGF-beta induced TARBP2 interacting lncRNA
	PRR34-AS1 Gene (Entity type)	ENSG00000197182 - PRR34 antisense RNA 1

H3-7

Gene (Entity type)

ENSG00000273213 - H3.7 histone (putative)

MTCO2P12

Gene (Entity type)

ENSG00000229344 - MT-CO2 pseudogene 12

MIR100HG

Gene (Entity type)

ENSG00000255248 - mir-100-let-7a-2-mir-125b-1 cluster host gene

MAGI2-AS3

Gene (Entity type)

ENSG00000234456 - MAGI2 antisense RNA 3

FRG1CP

Gene (Entity type)

ENSG00000282826 - FSHD region gene 1 family member C, pseudogene

C22orf46P

Gene (Entity type)

ENSG00000293428 - CTA-216E10.6

LOC339260

Gene (Entity type)

ENSG00000233098 - uncharacterized LOC339260

NKILA

Gene (Entity type)

ENSG00000278709 - NF-kappaB interacting lncRNA

TGILR

Gene (Entity type)

ENSG00000260604 - TGF-beta induced TARBP2 interacting lncRNA

PRR34-AS1

Gene (Entity type)

ENSG00000197182 - PRR34 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.