GSE197635 NTN4 overexpression SK-BR-3 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_up.

Results found

Linked to

	Label	Description
	PRR34-AS1 Gene (Entity type)	ENSG00000197182 - PRR34 antisense RNA 1
	SNAI3-AS1 Gene (Entity type)	ENSG00000260630 - SNAI3 antisense RNA 1
	DBH-AS1 Gene (Entity type)	ENSG00000225756 - DBH antisense RNA 1
	ITGB1-DT Gene (Entity type)	ENSG00000229656 - ITGB1 divergent transcript
	LINC02688 Gene (Entity type)	ENSG00000254872 - long intergenic non-protein coding RNA 2688
	FAM222A-AS1 Gene (Entity type)	ENSG00000255650 - FAM222A antisense RNA 1
	LINC02023 Gene (Entity type)	ENSG00000239205 - long intergenic non-protein coding RNA 2023
	LOC124902888 Gene (Entity type)	ENSG00000256389 - uncharacterized LOC124902888
	PGAM1P5 Gene (Entity type)	ENSG00000293270 - phosphoglycerate mutase 1 pseudogene 5
	RPL23AP65 Gene (Entity type)	ENSG00000243964 - ribosomal protein L23a pseudogene 65

PRR34-AS1

Gene (Entity type)

ENSG00000197182 - PRR34 antisense RNA 1

SNAI3-AS1

Gene (Entity type)

ENSG00000260630 - SNAI3 antisense RNA 1

DBH-AS1

Gene (Entity type)

ENSG00000225756 - DBH antisense RNA 1

ITGB1-DT

Gene (Entity type)

ENSG00000229656 - ITGB1 divergent transcript

LINC02688

Gene (Entity type)

ENSG00000254872 - long intergenic non-protein coding RNA 2688

FAM222A-AS1

Gene (Entity type)

ENSG00000255650 - FAM222A antisense RNA 1

LINC02023

Gene (Entity type)

ENSG00000239205 - long intergenic non-protein coding RNA 2023

LOC124902888

Gene (Entity type)

ENSG00000256389 - uncharacterized LOC124902888

PGAM1P5

Gene (Entity type)

ENSG00000293270 - phosphoglycerate mutase 1 pseudogene 5

RPL23AP65

Gene (Entity type)

ENSG00000243964 - ribosomal protein L23a pseudogene 65

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.