GSE203329 HCC knockout 2 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE203329_HCC knockout_2_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE203329_HCC knockout_2_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE203329_HCC knockout_2_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE203329_HCC knockout_2_v_3_human_up.

Results found

Linked to

	Label	Description
	H2BC8 Gene Gene (Entity type)	ENSG00000273802 - H2B clustered histone 8
	DANCR Gene (Entity type)	ENSG00000226950 - differentiation antagonizing non-protein coding RNA
	C19orf48P Gene (Entity type)	ENSG00000293495 - multidrug resistance-related protein
	SNHG15 Gene (Entity type)	ENSG00000232956 - small nucleolar RNA host gene 15
	MTCO2P12 Gene (Entity type)	ENSG00000229344 - MT-CO2 pseudogene 12
	MTATP6P1 Gene (Entity type)	ENSG00000248527 - MT-ATP6 pseudogene 1
	SLC12A2-DT Gene (Entity type)	ENSG00000245937 - SLC12A2 divergent transcript
	PI4KAP2 Gene (Entity type)	ENSG00000293427 - phosphatidylinositol 4-kinase alpha pseudogene 2
	H2AC17 Gene (Entity type)	ENSG00000278677 - H2A clustered histone 17
	NSUN5P2 Gene (Entity type)	ENSG00000290831 - NSUN5 pseudogene 2

H2BC8 Gene

Gene (Entity type)

ENSG00000273802 - H2B clustered histone 8

DANCR

Gene (Entity type)

ENSG00000226950 - differentiation antagonizing non-protein coding RNA

C19orf48P

Gene (Entity type)

ENSG00000293495 - multidrug resistance-related protein

SNHG15

Gene (Entity type)

ENSG00000232956 - small nucleolar RNA host gene 15

MTCO2P12

Gene (Entity type)

ENSG00000229344 - MT-CO2 pseudogene 12

MTATP6P1

Gene (Entity type)

ENSG00000248527 - MT-ATP6 pseudogene 1

SLC12A2-DT

Gene (Entity type)

ENSG00000245937 - SLC12A2 divergent transcript

PI4KAP2

Gene (Entity type)

ENSG00000293427 - phosphatidylinositol 4-kinase alpha pseudogene 2

H2AC17

Gene (Entity type)

ENSG00000278677 - H2A clustered histone 17

NSUN5P2

Gene (Entity type)

ENSG00000290831 - NSUN5 pseudogene 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.