GSE249471 bms LNCaP M 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE249471_bms_LNCaP M_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE249471_bms_LNCaP M_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE249471_bms_LNCaP M_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE249471_bms_LNCaP M_0_v_1_human_up.

Results found

Linked to

	Label	Description
	HCP5 Gene (Entity type)	ENSG00000206337 - HLA complex P5
	CUTALP Gene (Entity type)	ENSG00000293514 - cutA divalent cation tolerance like, pseudogene
	FGD5-AS1 Gene (Entity type)	ENSG00000225733 - FGD5 antisense RNA 1
	SNHG12 Gene (Entity type)	ENSG00000197989 - small nucleolar RNA host gene 12
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667
	DUBR Gene (Entity type)	ENSG00000243701 - DPPA2 upstream binding RNA
	LINC01963 Gene (Entity type)	ENSG00000260804 - long intergenic non-protein coding RNA 1963
	ZNF542P Gene (Entity type)	ENSG00000290720 - zinc finger protein 542, pseudogene
	C22orf46P Gene (Entity type)	ENSG00000293428 - CTA-216E10.6
	HERPUD2-AS1 Gene (Entity type)	ENSG00000271122 - HERPUD2 antisense RNA 1

HCP5

Gene (Entity type)

ENSG00000206337 - HLA complex P5

CUTALP

Gene (Entity type)

ENSG00000293514 - cutA divalent cation tolerance like, pseudogene

FGD5-AS1

Gene (Entity type)

ENSG00000225733 - FGD5 antisense RNA 1

SNHG12

Gene (Entity type)

ENSG00000197989 - small nucleolar RNA host gene 12

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

DUBR

Gene (Entity type)

ENSG00000243701 - DPPA2 upstream binding RNA

LINC01963

Gene (Entity type)

ENSG00000260804 - long intergenic non-protein coding RNA 1963

ZNF542P

Gene (Entity type)

ENSG00000290720 - zinc finger protein 542, pseudogene

C22orf46P

Gene (Entity type)

ENSG00000293428 - CTA-216E10.6

HERPUD2-AS1

Gene (Entity type)

ENSG00000271122 - HERPUD2 antisense RNA 1

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.