GSE133933 fibulin-3 knockdown 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133933_fibulin-3 knockdown_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133933_fibulin-3 knockdown_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133933_fibulin-3 knockdown_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133933_fibulin-3 knockdown_0_v_1_human_up.

Results found

Linked to

	Label	Description
	LINC01152 Gene (Entity type)	ENSG00000256124 - long intergenic non-protein coding RNA 1152
	OFD1P1Y Gene (Entity type)	ENSG00000226011 - OFD1 pseudogene 1 Y-linked
	RPL21P4 Gene (Entity type)	ENSG00000240828 - ribosomal protein L21 pseudogene 4
	RPL6 Gene (Entity type)	ENSG00000089009 - ribosomal protein L6
	TM4SF19 Gene (Entity type)	ENSG00000145107 - transmembrane 4 L six family member 19
	TFE3 Gene (Entity type)	ENSG00000068323 - transcription factor binding to IGHM enhancer 3
	RPS20 Gene (Entity type)	ENSG00000008988 - ribosomal protein S20
	SYVN1 Gene (Entity type)	ENSG00000162298 - synoviolin 1
	PTPRN Gene (Entity type)	ENSG00000054356 - protein tyrosine phosphatase receptor type N
	MSANTD3 Gene (Entity type)	ENSG00000066697 - Myb/SANT DNA binding domain containing 3

LINC01152

Gene (Entity type)

ENSG00000256124 - long intergenic non-protein coding RNA 1152

OFD1P1Y

Gene (Entity type)

ENSG00000226011 - OFD1 pseudogene 1 Y-linked

RPL21P4

Gene (Entity type)

ENSG00000240828 - ribosomal protein L21 pseudogene 4

RPL6

Gene (Entity type)

ENSG00000089009 - ribosomal protein L6

TM4SF19

Gene (Entity type)

ENSG00000145107 - transmembrane 4 L six family member 19

TFE3

Gene (Entity type)

ENSG00000068323 - transcription factor binding to IGHM enhancer 3

RPS20

Gene (Entity type)

ENSG00000008988 - ribosomal protein S20

SYVN1

Gene (Entity type)

ENSG00000162298 - synoviolin 1

PTPRN

Gene (Entity type)

ENSG00000054356 - protein tyrosine phosphatase receptor type N

MSANTD3

Gene (Entity type)

ENSG00000066697 - Myb/SANT DNA binding domain containing 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.