GSE85880 GSE85881 tretinoin cardiac muscle cell 4 v 2 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

Results found

Linked to

	Label	Description
	LOC389906 Gene (Entity type)	ENSG00000285756 - zinc finger protein 839 pseudogene
	NBPF26 Gene (Entity type)	ENSG00000273136 - NBPF member 26
	HAGLR Gene (Entity type)	ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA
	HOTAIRM1 Gene (Entity type)	ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1
	H3C6 Gene (Entity type)	ENSG00000274750 - H3 clustered histone 6
	DLEU2 Gene (Entity type)	ENSG00000231607 - deleted in lymphocytic leukemia 2
	NR2F1-AS1 Gene (Entity type)	ENSG00000237187 - NR2F1 regulatory antisense RNA 1
	PCBP1-AS1 Gene (Entity type)	ENSG00000293616 - PCBP1 antisense RNA 1
	STAG3L5P Gene (Entity type)	ENSG00000272752 - STAG3 cohesin complex component like 5, pseudogene
	HOXA-AS3 Gene (Entity type)	ENSG00000254369 - HOXA cluster antisense RNA 3

LOC389906

Gene (Entity type)

ENSG00000285756 - zinc finger protein 839 pseudogene

NBPF26

Gene (Entity type)

ENSG00000273136 - NBPF member 26

HAGLR

Gene (Entity type)

ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA

HOTAIRM1

Gene (Entity type)

ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1

H3C6

Gene (Entity type)

ENSG00000274750 - H3 clustered histone 6

DLEU2

Gene (Entity type)

ENSG00000231607 - deleted in lymphocytic leukemia 2

NR2F1-AS1

Gene (Entity type)

ENSG00000237187 - NR2F1 regulatory antisense RNA 1

PCBP1-AS1

Gene (Entity type)

ENSG00000293616 - PCBP1 antisense RNA 1

STAG3L5P

Gene (Entity type)

ENSG00000272752 - STAG3 cohesin complex component like 5, pseudogene

HOXA-AS3

Gene (Entity type)

ENSG00000254369 - HOXA cluster antisense RNA 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.