GSE85880 GSE85881 tretinoin cardiac muscle cell 0 v 2 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_2_human_dn.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	NORAD Gene (Entity type)	ENSG00000260032 - non-coding RNA activated by DNA damage
	SNHG18 Gene (Entity type)	ENSG00000250786 - small nucleolar RNA host gene 18
	FAM131B-AS2 Gene (Entity type)	ENSG00000232533 - FAM131B antisense RNA 2
	BISPR Gene (Entity type)	ENSG00000282851 - BST2 interferon stimulated positive regulator
	LINC00261 Gene (Entity type)	ENSG00000259974 - long intergenic non-protein coding RNA 261
	KDM7A-DT Gene (Entity type)	ENSG00000260231 - KDM7A divergent transcript
	LOC729732 Gene (Entity type)	ENSG00000283674 - uncharacterized LOC729732
	STEAP1B-AS1 Gene (Entity type)	ENSG00000232759 - STEAP1B antisense RNA 1
	C1RL-AS1 Gene (Entity type)	ENSG00000205885 - C1RL antisense RNA 1

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

NORAD

Gene (Entity type)

ENSG00000260032 - non-coding RNA activated by DNA damage

SNHG18

Gene (Entity type)

ENSG00000250786 - small nucleolar RNA host gene 18

FAM131B-AS2

Gene (Entity type)

ENSG00000232533 - FAM131B antisense RNA 2

BISPR

Gene (Entity type)

ENSG00000282851 - BST2 interferon stimulated positive regulator

LINC00261

Gene (Entity type)

ENSG00000259974 - long intergenic non-protein coding RNA 261

KDM7A-DT

Gene (Entity type)

ENSG00000260231 - KDM7A divergent transcript

LOC729732

Gene (Entity type)

ENSG00000283674 - uncharacterized LOC729732

STEAP1B-AS1

Gene (Entity type)

ENSG00000232759 - STEAP1B antisense RNA 1

C1RL-AS1

Gene (Entity type)

ENSG00000205885 - C1RL antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.