GSE189859 GSE189861 IDH1 knockout 3 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_up.

Results found

Linked to

	Label	Description
	SNHG5 Gene (Entity type)	ENSG00000203875 - small nucleolar RNA host gene 5
	MIR1915HG Gene (Entity type)	ENSG00000204682 - MIR1915 host gene
	MAGI2-AS3 Gene (Entity type)	ENSG00000234456 - MAGI2 antisense RNA 3
	LOC645485 Gene (Entity type)	ENSG00000285517 - uncharacterized LOC645485
	CNTNAP3C Gene (Entity type)	ENSG00000283378 - contactin associated protein family member 3C
	LINC00842 Gene (Entity type)	ENSG00000285294 - long intergenic non-protein coding RNA 842
	SMIM29-AS1 Gene (Entity type)	ENSG00000225339 - SMIM29 antisense RNA 1
	LYPLAL1-DT Gene (Entity type)	ENSG00000228063 - LYPLAL1 divergent transcript
	ITGB1-DT Gene (Entity type)	ENSG00000229656 - ITGB1 divergent transcript
	SLC22A20P Gene (Entity type)	ENSG00000293475 - solute carrier family 22 member 20, pseudogene

SNHG5

Gene (Entity type)

ENSG00000203875 - small nucleolar RNA host gene 5

MIR1915HG

Gene (Entity type)

ENSG00000204682 - MIR1915 host gene

MAGI2-AS3

Gene (Entity type)

ENSG00000234456 - MAGI2 antisense RNA 3

LOC645485

Gene (Entity type)

ENSG00000285517 - uncharacterized LOC645485

CNTNAP3C

Gene (Entity type)

ENSG00000283378 - contactin associated protein family member 3C

LINC00842

Gene (Entity type)

ENSG00000285294 - long intergenic non-protein coding RNA 842

SMIM29-AS1

Gene (Entity type)

ENSG00000225339 - SMIM29 antisense RNA 1

LYPLAL1-DT

Gene (Entity type)

ENSG00000228063 - LYPLAL1 divergent transcript

ITGB1-DT

Gene (Entity type)

ENSG00000229656 - ITGB1 divergent transcript

SLC22A20P

Gene (Entity type)

ENSG00000293475 - solute carrier family 22 member 20, pseudogene

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.