GSE168101 BRD4 knockout KBM-7 SLC Nucleoside Transport Proteins 2 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_dn.

Results found

Linked to

	Label	Description
	HMGB1P5 Gene (Entity type)	ENSG00000293339 - high mobility group box 1 pseudogene 5
	BCYRN1 Gene (Entity type)	ENSG00000236824 - brain cytoplasmic RNA 1
	ASDURF Gene (Entity type)	ENSG00000286053 - ASNSD1 upstream open reading frame
	GOLGA2P10 Gene (Entity type)	ENSG00000290948 - GOLGA2 pseudogene 10
	SNHG19 Gene (Entity type)	ENSG00000260260 - small nucleolar RNA host gene 19
	RUSC1-AS1 Gene (Entity type)	ENSG00000225855 - RUSC1 antisense RNA 1
	RN7SL1 Gene (Entity type)	ENSG00000276168 - RNA component of signal recognition particle 7SL1
	SNHG25 Gene (Entity type)	ENSG00000266402 - small nucleolar RNA host gene 25
	LOC105372401 Gene (Entity type)	ENSG00000286177 - uncharacterized LOC105372401
	LINC01602 Gene (Entity type)	ENSG00000205293 - long intergenic non-protein coding RNA 1602

HMGB1P5

Gene (Entity type)

ENSG00000293339 - high mobility group box 1 pseudogene 5

BCYRN1

Gene (Entity type)

ENSG00000236824 - brain cytoplasmic RNA 1

ASDURF

Gene (Entity type)

ENSG00000286053 - ASNSD1 upstream open reading frame

GOLGA2P10

Gene (Entity type)

ENSG00000290948 - GOLGA2 pseudogene 10

SNHG19

Gene (Entity type)

ENSG00000260260 - small nucleolar RNA host gene 19

RUSC1-AS1

Gene (Entity type)

ENSG00000225855 - RUSC1 antisense RNA 1

RN7SL1

Gene (Entity type)

ENSG00000276168 - RNA component of signal recognition particle 7SL1

SNHG25

Gene (Entity type)

ENSG00000266402 - small nucleolar RNA host gene 25

LOC105372401

Gene (Entity type)

ENSG00000286177 - uncharacterized LOC105372401

LINC01602

Gene (Entity type)

ENSG00000205293 - long intergenic non-protein coding RNA 1602

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.