GSE178679 bms 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE178679_bms_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE178679_bms_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE178679_bms_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE178679_bms_1_v_3_human_up.

Results found

Linked to

	Label	Description
	TALAM1 Gene (Entity type)	ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA
	ABCF2-H2BK1 Gene (Entity type)	ENSG00000285292 - ABCF2-H2BK1 readthrough
	H2AC18 Gene (Entity type)	ENSG00000288825 - H2A clustered histone 18
	RPL3P4 Gene (Entity type)	ENSG00000232573 - ribosomal protein L3 pseudogene 4
	LINC03126 Gene (Entity type)	ENSG00000228549 - long intergenic non-protein coding RNA 3126
	CCT6A3P Gene (Entity type)	ENSG00000290860 - chaperonin containing TCP1 family member 6A3, pseudogene
	LINC01783 Gene (Entity type)	ENSG00000233421 - long intergenic non-protein coding RNA 1783
	LINC01962 Gene (Entity type)	ENSG00000248473 - long intergenic non-protein coding RNA 1962
	RNU5B-1 Gene (Entity type)	ENSG00000200156 - RNA, U5B small nuclear 1
	SNORD104 Gene (Entity type)	ENSG00000199753 - small nucleolar RNA, C/D box 104

TALAM1

Gene (Entity type)

ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA

ABCF2-H2BK1

Gene (Entity type)

ENSG00000285292 - ABCF2-H2BK1 readthrough

H2AC18

Gene (Entity type)

ENSG00000288825 - H2A clustered histone 18

RPL3P4

Gene (Entity type)

ENSG00000232573 - ribosomal protein L3 pseudogene 4

LINC03126

Gene (Entity type)

ENSG00000228549 - long intergenic non-protein coding RNA 3126

CCT6A3P

Gene (Entity type)

ENSG00000290860 - chaperonin containing TCP1 family member 6A3, pseudogene

LINC01783

Gene (Entity type)

ENSG00000233421 - long intergenic non-protein coding RNA 1783

LINC01962

Gene (Entity type)

ENSG00000248473 - long intergenic non-protein coding RNA 1962

RNU5B-1

Gene (Entity type)

ENSG00000200156 - RNA, U5B small nuclear 1

SNORD104

Gene (Entity type)

ENSG00000199753 - small nucleolar RNA, C/D box 104

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.