GSE225900 HSDL2 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE225900_HSDL2 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE225900_HSDL2 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE225900_HSDL2 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE225900_HSDL2 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	MIR100HG Gene (Entity type)	ENSG00000255248 - mir-100-let-7a-2-mir-125b-1 cluster host gene
	ITGB2-AS1 Gene (Entity type)	ENSG00000227039 - ITGB2 antisense RNA 1
	LOC389602 Gene (Entity type)	ENSG00000204876 - uncharacterized LOC389602
	LITATS1 Gene (Entity type)	ENSG00000233621 - lncRNA induced by TGF-beta and antagonizes TGF-beta signaling 1
	ZNNT1 Gene (Entity type)	ENSG00000261087 - ZNF706 neighboring transcript 1
	LINC00957 Gene (Entity type)	ENSG00000235314 - long intergenic non-protein coding RNA 957
	LINC01152 Gene (Entity type)	ENSG00000256124 - long intergenic non-protein coding RNA 1152
	HLA-K Gene (Entity type)	ENSG00000230795 - major histocompatibility complex, class I, K (pseudogene)
	OVAAL Gene (Entity type)	ENSG00000236719 - ovarian adenocarcinoma amplified long non-coding RNA
	LINC02569 Gene (Entity type)	ENSG00000235781 - long intergenic non-protein coding RNA 2569

MIR100HG

Gene (Entity type)

ENSG00000255248 - mir-100-let-7a-2-mir-125b-1 cluster host gene

ITGB2-AS1

Gene (Entity type)

ENSG00000227039 - ITGB2 antisense RNA 1

LOC389602

Gene (Entity type)

ENSG00000204876 - uncharacterized LOC389602

LITATS1

Gene (Entity type)

ENSG00000233621 - lncRNA induced by TGF-beta and antagonizes TGF-beta signaling 1

ZNNT1

Gene (Entity type)

ENSG00000261087 - ZNF706 neighboring transcript 1

LINC00957

Gene (Entity type)

ENSG00000235314 - long intergenic non-protein coding RNA 957

LINC01152

Gene (Entity type)

ENSG00000256124 - long intergenic non-protein coding RNA 1152

HLA-K

Gene (Entity type)

ENSG00000230795 - major histocompatibility complex, class I, K (pseudogene)

OVAAL

Gene (Entity type)

ENSG00000236719 - ovarian adenocarcinoma amplified long non-coding RNA

LINC02569

Gene (Entity type)

ENSG00000235781 - long intergenic non-protein coding RNA 2569

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.