GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 3 v 9 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_9_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_9_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_9_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_9_human_dn.

Results found

Linked to

	Label	Description
	SNHG12 Gene (Entity type)	ENSG00000197989 - small nucleolar RNA host gene 12
	MIR34AHG Gene (Entity type)	ENSG00000228526 - MIR34A host gene
	TMEM147-AS1 Gene (Entity type)	ENSG00000236144 - TMEM147 antisense RNA 1
	THUMPD3-AS1 Gene (Entity type)	ENSG00000206573 - THUMPD3 antisense RNA 1
	MAP3K9-DT Gene (Entity type)	ENSG00000259153 - MAP3K9 divergent transcript
	LOC105377329 Gene (Entity type)	ENSG00000251095 - uncharacterized LOC105377329
	CLDN14-AS1 Gene (Entity type)	ENSG00000230479 - CLDN14 antisense RNA 1
	TMEM51-AS1 Gene (Entity type)	ENSG00000175147 - TMEM51 antisense RNA 1
	RAB35-AS1 Gene (Entity type)	ENSG00000277283 - RAB35 antisense RNA 1
	LOC101927888 Gene (Entity type)	ENSG00000231811 - uncharacterized LOC101927888

SNHG12

Gene (Entity type)

ENSG00000197989 - small nucleolar RNA host gene 12

MIR34AHG

Gene (Entity type)

ENSG00000228526 - MIR34A host gene

TMEM147-AS1

Gene (Entity type)

ENSG00000236144 - TMEM147 antisense RNA 1

THUMPD3-AS1

Gene (Entity type)

ENSG00000206573 - THUMPD3 antisense RNA 1

MAP3K9-DT

Gene (Entity type)

ENSG00000259153 - MAP3K9 divergent transcript

LOC105377329

Gene (Entity type)

ENSG00000251095 - uncharacterized LOC105377329

CLDN14-AS1

Gene (Entity type)

ENSG00000230479 - CLDN14 antisense RNA 1

TMEM51-AS1

Gene (Entity type)

ENSG00000175147 - TMEM51 antisense RNA 1

RAB35-AS1

Gene (Entity type)

ENSG00000277283 - RAB35 antisense RNA 1

LOC101927888

Gene (Entity type)

ENSG00000231811 - uncharacterized LOC101927888

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.