GSE153354 TCF19 knockout CAL-27 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE153354_TCF19 knockout_CAL-27_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE153354_TCF19 knockout_CAL-27_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE153354_TCF19 knockout_CAL-27_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE153354_TCF19 knockout_CAL-27_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	HCP5 Gene (Entity type)	ENSG00000206337 - HLA complex P5
	SNHG3 Gene (Entity type)	ENSG00000242125 - small nucleolar RNA host gene 3
	PVT1 Gene (Entity type)	ENSG00000249859 - Pvt1 oncogene
	OLMALINC Gene (Entity type)	ENSG00000235823 - oligodendrocyte maturation-associated long intergenic non-coding RNA
	HOTAIRM1 Gene (Entity type)	ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1
	NSUN5P1 Gene (Entity type)	ENSG00000291151 - NSUN5 pseudogene 1
	LINC01963 Gene (Entity type)	ENSG00000260804 - long intergenic non-protein coding RNA 1963
	NMRAL2P Gene (Entity type)	ENSG00000290862 - NmrA like redox sensor 2, pseudogene
	LOC339260 Gene (Entity type)	ENSG00000233098 - uncharacterized LOC339260
	TMEM198B Gene (Entity type)	ENSG00000293491 - transmembrane protein 198B (pseudogene)

HCP5

Gene (Entity type)

ENSG00000206337 - HLA complex P5

SNHG3

Gene (Entity type)

ENSG00000242125 - small nucleolar RNA host gene 3

PVT1

Gene (Entity type)

ENSG00000249859 - Pvt1 oncogene

OLMALINC

Gene (Entity type)

ENSG00000235823 - oligodendrocyte maturation-associated long intergenic non-coding RNA

HOTAIRM1

Gene (Entity type)

ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1

NSUN5P1

Gene (Entity type)

ENSG00000291151 - NSUN5 pseudogene 1

LINC01963

Gene (Entity type)

ENSG00000260804 - long intergenic non-protein coding RNA 1963

NMRAL2P

Gene (Entity type)

ENSG00000290862 - NmrA like redox sensor 2, pseudogene

LOC339260

Gene (Entity type)

ENSG00000233098 - uncharacterized LOC339260

TMEM198B

Gene (Entity type)

ENSG00000293491 - transmembrane protein 198B (pseudogene)

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.