GSE233140 doxycycline HT [Human HeLa contaminated cell line] 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE233140_doxycycline_HT [Human HeLa contaminated cell line]_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	LOC102724323 Gene (Entity type)	ENSG00000231964 - uncharacterized LOC102724323
	TMSB4XP4 Gene (Entity type)	ENSG00000223551 - TMSB4X pseudogene 4
	LINC01585 Gene (Entity type)	ENSG00000245479 - long intergenic non-protein coding RNA 1585
	RPL21P119 Gene (Entity type)	ENSG00000220793 - ribosomal protein L21 pseudogene 119
	ACTBP1 Gene (Entity type)	ENSG00000229145 - ACTB pseudogene 1
	RPL23P8 Gene (Entity type)	ENSG00000219451 - ribosomal protein L23 pseudogene 8
	RPL17P43 Gene (Entity type)	ENSG00000228331 - ribosomal protein L17 pseudogene 43
	LINC02166 Gene (Entity type)	ENSG00000260259 - long intergenic non-protein coding RNA 2166
	HSPB8-AS1 Gene (Entity type)	ENSG00000256609 - HSPB8 antisense RNA 1
	OR5AU1 Gene (Entity type)	ENSG00000169327 - olfactory receptor family 5 subfamily AU member 1

LOC102724323

Gene (Entity type)

ENSG00000231964 - uncharacterized LOC102724323

TMSB4XP4

Gene (Entity type)

ENSG00000223551 - TMSB4X pseudogene 4

LINC01585

Gene (Entity type)

ENSG00000245479 - long intergenic non-protein coding RNA 1585

RPL21P119

Gene (Entity type)

ENSG00000220793 - ribosomal protein L21 pseudogene 119

ACTBP1

Gene (Entity type)

ENSG00000229145 - ACTB pseudogene 1

RPL23P8

Gene (Entity type)

ENSG00000219451 - ribosomal protein L23 pseudogene 8

RPL17P43

Gene (Entity type)

ENSG00000228331 - ribosomal protein L17 pseudogene 43

LINC02166

Gene (Entity type)

ENSG00000260259 - long intergenic non-protein coding RNA 2166

HSPB8-AS1

Gene (Entity type)

ENSG00000256609 - HSPB8 antisense RNA 1

OR5AU1

Gene (Entity type)

ENSG00000169327 - olfactory receptor family 5 subfamily AU member 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.